東北大学研究者紹介

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ユスダル　ムスタミン

Yusdar Mustamin

所属

大学院生命科学研究科　生態発生適応科学専攻　生態ダイナミクス講座（共生ゲノミクス分野）

職名

助教

学位

博士（生命科学）（東北大学）

researchmap

https://researchmap.jp/yusdar.mustamin

J-GLOBAL ID

202201012175406424

e-Rad 研究者番号

51026810

ORCID

https://orcid.org/0000-0002-3277-601X

経歴 3

2022年8月～継続中

東北大学　大学院生命科学研究科　助教
2020年10月～ 2022年7月

東北大学　大学院生命科学研究科　学術研究員
2017年10月～ 2020年9月

東北大学　大学院生命科学研究科　MEXT Scholar

学歴 3

東北大学　大学院生命科学研究科

2017年～ 2020年
Bogor Agricultural University　Plant Biology

2014年～ 2017年
Hasanuddin University　Biology

2009年～ 2013年

所属学協会 1

Japanese Society of Plant-Microbe Interactions

研究キーワード 9

Plant physiology
Genomics
Synthetic microbial communities
Plant-microbe interactions
Plant cold tolerance
Lotus japonicus
Transcriptomics
Plant-environment interaction
Molecular biology

研究分野 3

環境・農学 / 遺伝育種科学 /
ライフサイエンス / 植物分子、生理科学 /
ライフサイエンス / 進化生物学 /

受賞 1

Best Poster Award

2018年　The 6th Plant Dormancy Symposium

論文 6

Microbiome interactions increase plant haplotype richness

Stig Andersen, Johan Quilbé, Troels Mouritzen, Turgut Akyol, Yusdar Mustamin, Masaru Bamba, Mikkel Schierup, Shusei Sato

2024年10月8日

DOI： 10.21203/rs.3.rs-5130034/v1 　
Daily Activity and Honey Production Patterns of Tetragonula laeviceps Smith (Hymenoptera: Apidae) During the Wet and Dry Seasons

Andi Gita Maulidyah Indraswari Suhri, Bambang Retnoaji, Yusdar Mustamin, Sih Kahono

Journal of Tropical Biodiversity and Biotechnology　2024年10月1日

DOI： 10.22146/jtbb.84083 　
FER and LecRK show haplotype-dependent cold-responsiveness and mediate freezing tolerance in Lotus japonicus 査読有り

Yusdar Mustamin, Turgut Yigit Akyol, Max Gordon, Andi Madihah Manggabarani, Yoshiko Isomura, Yasuko Kawamura, Masaru Bamba, Cranos Williams, Stig Uggerhøj Andersen, Shusei Sato

Plant Physiology　2022年11月30日
出版者・発行元： Oxford University Press (OUP)
DOI： 10.1093/plphys/kiac533 　

ISSN：0032-0889

eISSN：1532-2548

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ABSTRACT Many plant species have succeeded in colonizing a wide range of diverse climates through local adaptation, but the underlying molecular genetics remain obscure. We previously found that winter survival was a direct target of selection during colonization of Japan by the perennial legume Lotus japonicus and identified associated candidate genes. Here, we show that two of these, FERONIA-receptor like kinase (LjFER) and a S-receptor-like kinase gene (LjLecRK) are required for non-acclimated freezing tolerance and show haplotype-dependent cold-responsive expression. Our work suggests that recruiting a conserved growth regulator gene, FER, and a receptor-like kinase gene, LecRK, into the set of cold-responsive genes has contributed to freezing tolerance and local climate adaptation in L. japonicus, offering functional genetic insight into perennial herb evolution.
Construction of prediction models for growth traits of soybean cultivars based on phenotyping in diverse genotype and environment combinations. 国際誌

Andi Madihah Manggabarani, Takuyu Hashiguchi, Masatsugu Hashiguchi, Atsushi Hayashi, Masataka Kikuchi, Yusdar Mustamin, Masaru Bamba, Kunihiro Kodama, Takanari Tanabata, Sachiko Isobe, Hidenori Tanaka, Ryo Akashi, Akihiro Nakaya, Shusei Sato

DNA research : an international journal for rapid publication of reports on genes and genomes　29　(4)　2022年6月25日

DOI： 10.1093/dnares/dsac024 　

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As soybean cultivars are adapted to a relatively narrow range of latitude, the effects of climate changes are estimated to be severe. To address this issue, it is important to improve our understanding of the effects of climate change by applying the simulation model including both genetic and environmental factors with their interactions (G×E). To achieve this goal, we conducted the field experiments for soybean core collections using multiple sowing times in multi-latitudinal fields. Sowing time shifts altered the flowering time (FT) and growth phenotypes, and resulted in increasing the combinations of genotypes and environments. Genome-wide association studies for the obtained phenotypes revealed the effects of field and sowing time to the significance of detected alleles, indicating the presence of G×E. By using accumulated phenotypic and environmental data in 2018 and 2019, we constructed multiple regression models for FT and growth pattern. Applicability of the constructed models was evaluated by the field experiments in 2020 including a novel field, and high correlation between the predicted and measured values was observed, suggesting the robustness of the models. The models presented here would allow us to predict the phenotype of the core collections in a given environment.
Receptor-like kinases FER and SRK mediate Lotus japonicus freezing tolerance and climate adaptation

Yusdar Mustamin, Turgut Yigit Akyol, Max Gordon, Andi Madihah Manggabarani, Yoshiko Isomura, Yasuko Kawamura, Masaru Bamba, Cranos Williams, Stig Uggerhøj Andersen, Shusei Sato

2022年4月28日
出版者・発行元： Cold Spring Harbor Laboratory
DOI： 10.1101/2022.04.27.489728 　

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ABSTRACT Many plant species have succeeded in colonizing a wide range of diverse climates through local adaptation, but the underlying molecular genetics remain obscure. We previously found that winter survival was a direct target of selection during colonization of Japan by the perennial legume Lotus japonicus and identified associated candidate genes. Here, we show that two of these, the FERONIA-receptor like kinase (LjFER) and a novel S-receptor-like kinase (LjSRK) are required for non-acclimated freezing tolerance and show haplotype-dependent cold-responsive expression. Our work demonstrates that recruiting a conserved growth regulator, FER, and a novel receptor-like kinase, SRK, into the set of cold-responsive genes has contributed to freezing tolerance and local climate adaptation in L. japonicus, offering new functional genetic insight into perennial herb evolution.
Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan. 国際誌

Niraj Shah, Tomomi Wakabayashi, Yasuko Kawamura, Cathrine Kiel Skovbjerg, Ming-Zhuo Wang, Yusdar Mustamin, Yoshiko Isomura, Vikas Gupta, Haojie Jin, Terry Mun, Niels Sandal, Fuyuki Azuma, Eigo Fukai, Ümit Seren, Shohei Kusakabe, Yuki Kikuchi, Shogo Nitanda, Takashi Kumaki, Masatsugu Hashiguchi, Hidenori Tanaka, Atsushi Hayashi, Mads Sønderkær, Kaare Lehmann Nielsen, Korbinian Schneeberger, Bjarni Vilhjalmsson, Ryo Akashi, Jens Stougaard, Shusei Sato, Mikkel Heide Schierup, Stig Uggerhøj Andersen

Nature communications　11　(1)　253-253　2020年1月14日

DOI： 10.1038/s41467-019-14213-y 　

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Colonization of new habitats is expected to require genetic adaptations to overcome environmental challenges. Here, we use full genome re-sequencing and extensive common garden experiments to investigate demographic and selective processes associated with colonization of Japan by Lotus japonicus over the past ~20,000 years. Based on patterns of genomic variation, we infer the details of the colonization process where L. japonicus gradually spread from subtropical conditions to much colder climates in northern Japan. We identify genomic regions with extreme genetic differentiation between northern and southern subpopulations and perform population structure-corrected association mapping of phenotypic traits measured in a common garden. Comparing the results of these analyses, we find that signatures of extreme subpopulation differentiation overlap strongly with phenotype association signals for overwintering and flowering time traits. Our results provide evidence that these traits were direct targets of selection during colonization and point to associated candidate genes.

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講演・口頭発表等 24

根粒菌のⅢ型エフェクターに起因するミヤコグサの根粒共生制御

橋本駿, 番場大, 日下部翔平, Yusdar Mustamin, 金子貴一, 岡崎伸, 三井久, 幸, 佐藤修正

植物微生物研究会第34 回研究交流会　2025年9月17日
Uncovering host genotype–soil microbiota compatibility driving growth promotion in Lotus japonicus

Yusdar Mustamin, Satomi Nozawa, Masaru Bamba, Turgut Yigit Akyol, Johan B., Quilbe, Stig U. Andersen, Shusei Sato

The 34th annual meeting, Japanese Society of Plant Microbe Interactions　2025年9月18日
Balancing selection shapes root microbiome regulation in Lotus japonicus

Johan Quilbé, Troels W. Mouritzen, Turgut Akyol, Yusdar Mustamin, Masaru Bamba, Shusei Sato, Stig Uggerhøj Andersen

2025 International Society for Molecular Plant-Microbe Interactions (IS-MPMI) Congress, Cologne, Germany　2025年7月14日
根粒菌エフェクターに起因するミヤコグサの根粒共生制御機構の解析

橋本駿, 番場大, 日下部翔平, Yusdar Mustamin, 高澤瑞希, Ying Cui, Piromyou Pongde, Songwattana Pongpan, Tittabutr Panlada, Boonkerd Nantakorn, Teaumroong Neung, 金子貴一, 岡崎伸, 内海俊樹, 三井久幸, 佐藤修正

日本植物学会第88回大会　2024年9月16日
Establishment of the root-associated bacterial culture collection of Lotus japonicus and its application in analyzing host genotype-dependent interactions

Yusdar Mustamin, Masaru Bamba, Turgut Yigit Akyol, Johan Quilbe, Stig U. Andersen, Shusei Sato

The 33rd annual meeting, Japanese Society of Plant-Microbe Interaction　2024年8月28日
根粒菌エフェクターに起因するミヤコグサの根粒共生制御に関わる遺伝子の探索

橋本駿, 番場大, 日下部翔平, Yusdar Mustamin, 高澤瑞希, Ying Cui, Piromyou Pongde, Songwattana Pongpan, Tittabutr Panlada, Boonkerd Nantakorn, Teaumroong Neung, 金子貴一, 岡崎伸, 内海俊樹, 三井久幸, 佐藤修正

第33回研究交流会植物微⽣物研究会　2024年8月28日
Unveiling the role of ROOMIE1 in root microbiome dynamics: insights from natural variation in Lotus japonicus

Johan Quilbé, Troels W. Mouritzen, Turgut Akyol, Yusdar Mustamin, Masaru Bamba, Shusei Sato, Stig Uggerhøj Andersen

5th Plant Microbiome Symposium 2024 Amsterdam
Elucidation of local climate adaptation using natural variation 招待有り

Yusdar Mustamin

3rd GP-DS Data Science Cafe, GSIS Tohoku University　2024年6月19日
ミヤコグサ PINK4 遺伝子の機能と細胞内共生成立後の根粒菌共生制御

嵐田遥, 中川知己, 橋本駿, 番場大, Mustamin Yusdar, 三井久幸, 佐伯和彦, 川口正代司, 佐藤修正

第65回日本植物生理学会年会　2024年3月17日
ミヤコグサ PINK4 遺伝子を介した細胞内共生成立後の根粒菌共生制御

嵐田遥, 中川知己, 橋本駿, 番場大, Yusdar Mustamin, 三井久幸, 佐藤修正

植物微生物研究会第32回研究交流会　2023年9月27日
Analysis of local climate adaptation using natural variation

Yusdar Mustamin

CUT - Plant Science Meeting　2023年9月4日
ミヤコグサ・ダイズの野生系統リソースの情報整備とその活用

佐藤修正, Yusdar Mustamin, 番場大, 橋本駿, 橋口正嗣, 橋口拓勇, 田中秀典

第64回日本植物生理学会年会シンポジウム　2023年3月13日
細胞内共生成立後の根粒菌選別機構に関わるミヤコグサPINK4遺伝子の機能解析

嵐田遥, 中川知巳, 眞板寛子, 日下部翔平, 番場大, Yusdar Mustamin, 佐藤修正

植物微生物研究会第31回研究交流会　2022年9月8日
Identifying the candidate genes mediate freezing tolerance and climate adaptation in plants 招待有り

Yusdar Mustamin

Ege University International Fascination of Plants Day 2022 Symposium　2022年5月18日
ミヤコグサリソースを活用した環境適応機構の解析

佐藤修正, Yusdar Mustamin, 番場大, Turgut Yigit Akyol, Stig U Andersen, 橋口正嗣, 橋口拓勇, 田中秀典, 明石良

第63回日本植物生理学会年会シンポジウム　2022年3月22日
圃場栽培したミヤコグサの表現型を制御するゲノム領域の解析：画像解析を利用したアプローチ

高橋隼, 番場大, 三岡周子, Yusdar Mustamin, Andi Madihah Manggabarani, 磯村芳子, 林篤司, 七夕高也, 橋口拓勇, 橋口正嗣, 佐藤修正

日本植物学会第85回大会　2021年9月16日
ミヤコグサ関連リソースの最新状況とその応用

佐藤修正, Yusdar Mustamin, Madihah Manggabarani, 番場大, Turgut Akyol, Stig Andersen, Nadia Kamal, Klaus Mayer, 橋口正嗣, 田中秀典, 明石良

第62回日本植物生理学会　2021年3月14日
NBRPミヤコグサ・ダイズのリソースの最新状況

佐藤修正, 磯村芳子, Yusdar Mustamin, Andi Madihah Manggabarani, Stig U Andersen, Kamal N, Mayer K, 橋口正嗣, 田中秀典, 明石良

第61回日本植物生理学会年会　2020年3月19日
ミヤコグサ野生系統の耐塩性戦略とその地域適応との関連

磯村芳子, 佐藤修正, Yusdar Mustamin, Andi Madihah Manggabarani, Stig Andersen

第61回日本植物生理学会年会　2020年3月19日
Application of updated resources in the National BioResource Project Lotus/Glycine

Shusei Sato, Shohei Kusakabe, Yoshiko Isomura, Yusdar Mustamin, Madihah Manggabarani, Stig Andersen, Vikas Gupta, Nadia Kamal, Klaus Mayer, Masatsugu Hashiguchi, Hidenori Tanaka, Ryo Akashi

21st International Congress on Nitrogen Fixation (ICNF 2019)　2019年10月10日
Application of updated resources of the experimental model legume, Lotus japonicus

Shusei Sato, Yoshiko Isomura, Yusdar Mustamin, Madihah Manggabarani, Shohei Kusakabe, Stig Andersen, Vikas Gupta, Nadia Kamal, Klaus Mayer, Masatsugu Hashiguchi, Hidenori Tanaka, Ryo Akashi

5th Asian Conference on Plant-Microbe Symbiosis and Nitrogen Fixation　2019年5月15日
Genome-wide association study of winter hardiness phenotype in Lotus japonicus wild accession under field conditions

Yusdar Mustamin, Yasuko Kawamura, Stig U. Andersen, Shusei Sato

6th Plant Dormancy Symposium　2018年10月23日
Re-sequencing of wild accessions of Lotus japonicus and genome-wide association analysis of winter hardiness under field conditions

Yasuko Kawamura, Yuki Kikuchi, Shohei Kusakabe, Shougo Nitanda, Yusdar Mustamin, Ming-Zhuo Wang, Tomomi Wakabayashi, Hideki Hirakawa, Niraj Shah, Vikas Gupta, Stig Andersen, Shusei Sato

The 59th Annual Meeting of the Japanese Society of Plant Physiologists　2018年3月28日
Introduction of foreign genes in transgenic plants as new resistance mechanisms to bacterial disease

Yusdar Mustamin, Utut Widyastuti, Sony Suharsono

2nd University Consortium Graduate Forum (UCGF) – Southeast Asian Regional Center for Graduate Study and Research in Agriculture (SEARCA), Los Baños, Philippines.

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学術貢献活動 1

CCRP Visiting Scholars

Aarhus University, Denmark

2022年11月～ 2022年12月

学術貢献活動種別: 学術調査