研究者詳細

顔写真

ヨダ アキヨシ
依田 彬義
Akiyoshi Yoda
所属
大学院生命科学研究科 生態発生適応科学専攻 個体ダイナミクス講座(植物発生分野)
職名
特任助教(研究)
学位
  • 博士(農学)(東京農工大学)

  • 修士(農学)(宇都宮大学)

e-Rad 研究者番号
01032870

所属学協会 2

  • 日本植物生理学会

  • 植物化学調節学会

受賞 2

  1. Best poster presentation award, 17th World Congress on Parasitic Plants

    2024年6月

  2. 植物化学調節学会第53回大会 ポスター賞

    2018年11月

論文 11

  1. Spatial Localization of Strigolactone Biosynthesis and Secretion in Marchantia paleacea

    Akiyoshi Yoda, Kyoichi Kodama, Masaki Shimamura, Junko Kyozuka

    Plant and Cell Physiology 2025年10月30日

    DOI: 10.1093/pcp/pcaf144  

  2. Δ4-dn-iso-OPDA, a bioactive plant hormone of Marchantia polymorpha

    Takuya Kaji, Yuho Nishizato, Hidenori Yoshimatsu, Akiyoshi Yoda, Wenting Liang, Andrea Chini, Gemma Fernández-Barbero, Kei Nozawa, Junko Kyozuka, Roberto Solano, Minoru Ueda

    iScience 27 (7) 110191-110191 2024年7月

    出版者・発行元: Elsevier BV

    DOI: 10.1016/j.isci.2024.110191  

    ISSN:2589-0042

  3. DIENELACTONE HYDROLASE LIKE PROTEIN1 negatively regulates the KAI2-ligand pathway in Marchantia polymorpha

    Hiromu Kameoka, Shota Shimazaki, Kiyoshi Mashiguchi, Bunta Watanabe, Aino Komatsu, Akiyoshi Yoda, Yohei Mizuno, Kyoichi Kodama, Masanori Okamoto, Takahito Nomura, Shinjiro Yamaguchi, Junko Kyozuka

    Current Biology 33 (16) 3505-3513.e5 2023年8月

    出版者・発行元: Elsevier BV

    DOI: 10.1016/j.cub.2023.06.083  

    ISSN:0960-9822

  4. A Stereoselective Strigolactone Biosynthesis Catalyzed by a 2-Oxoglutarate-Dependent Dioxygenase in Sorghum

    Akiyoshi Yoda, Xiaonan Xie, Kaori Yoneyama, Kenji Miura, Christopher S P McErlean, Takahito Nomura

    Plant And Cell Physiology 64 (9) 1034-1045 2023年6月12日

    出版者・発行元: Oxford University Press (OUP)

    DOI: 10.1093/pcp/pcad060  

    ISSN:0032-0781

    eISSN:1471-9053

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    Abstract Seeds of root parasitic plants, Striga, Orobanche and Phelipanche spp., are induced to germinate by strigolactones (SLs) exudated from host roots. In Striga-resistant cultivars of Sorghum bicolor, the loss-of-function of the Low Germination Stimulant 1 (LGS1) gene changes the major SL from 5-deoxystrigol (5DS) to orobanchol, which has an opposite C-ring stereochemistry. The biosynthetic pathway of 5DS catalyzed by LGS1 has not been fully elucidated. Since other unknown regulators, in addition to LGS1 encoding a sulfotransferase, appear to be necessary for the stereoselective biosynthesis of 5DS, we examined Sobic.005G213500 (Sb3500), encoding a 2-oxoglutarate-dependent dioxygenase, as a candidate regulator, which is co-expressed with LGS1 and located 5ʹ-upstream of LGS1 in the sorghum genome. When LGS1 was expressed with known SL biosynthetic enzyme genes including the cytochrome P450 SbMAX1a in Nicotiana benthamiana leaves, 5DS and its diastereomer 4-deoxyorobanchol (4DO) were produced in approximately equal amounts, while the production of 5DS was significantly larger than that of 4DO when Sb3500 was also co-expressed. We also confirmed the stereoselective 5DS production in an in vitro feeding experiment using synthetic chemicals with recombinant proteins expressed in Escherichia coli and yeast. This finding demonstrates that Sb3500 is a stereoselective regulator in the conversion of the SL precursor carlactone to 5DS, catalyzed by LGS1 and SbMAX1a, providing a detailed understanding of how different SLs are produced to combat parasitic weed infestations.

  5. Identification of a Prunus <scp>MAX1</scp> homolog as a unique strigol synthase

    Sheng Wu, Anqi Zhou, Kozue Hiugano, Akiyoshi Yoda, Xiaonan Xie, Kenji Yamane, Kenji Miura, Takahito Nomura, Yanran Li

    New Phytologist 239 (5) 1819-1833 2023年6月9日

    出版者・発行元: Wiley

    DOI: 10.1111/nph.19052  

    ISSN:0028-646X

    eISSN:1469-8137

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    Summary Strigol is the first identified and one of the most important strigolactones (SLs), but the biosynthetic pathway remains elusive. We functionally identified a strigol synthase (cytochrome P450 711A enzyme) in the Prunus genus through rapid gene screening in a set of SL‐producing microbial consortia, and confirmed its unique catalytic activity (catalyzing multistep oxidation) through substrate feeding experiments and mutant analysis. We also reconstructed the biosynthetic pathway of strigol in Nicotiana benthamiana and reported the total biosynthesis of strigol in the Escherichia coli‐yeast consortium, from the simple sugar xylose, which paves the way for large‐scale production of strigol. As proof of concept, strigol and orobanchol were detected in Prunus persica root extrudes. This demonstrated a successful prediction of metabolites produced in plants through gene function identification, highlighting the importance of deciphering the sequence–function correlation of plant biosynthetic enzymes to more accurately predicate plant metabolites without metabolic analysis. This finding revealed the evolutionary and functional diversity of CYP711A (MAX1) in SL biosynthesis, which can synthesize different stereo‐configurations of SLs (strigol‐ or orobanchol‐type). This work again emphasizes the importance of microbial bioproduction platform as an efficient and handy tool to functionally identify plant metabolism.

  6. Heterologous expression of the lectin CmRlec from Cordyceps militaris (Cordycipitaceae, Ascomycota) in Escherichia coli

    Akiko Ono, Jili Zhang, Yuki Tanaka, Chihiro Sato, Akiyoshi Yoda, Makoto Ogata, Takahito Nomura, Tomohiro Suzuki

    Bioscience, Biotechnology, and Biochemistry 87 (7) 742-746 2023年4月18日

    出版者・発行元: Oxford University Press (OUP)

    DOI: 10.1093/bbb/zbad045  

    eISSN:1347-6947

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    ABSTRACT Ascomycete lectins may play an important role in their life cycle. In this report, we mined a ricin B-type lectin, named CmRlec, from the Cordyceps militaris genome by homology search. Furthermore, we succeeded in the soluble expression of CmRlec using β-glucuronidase as a solubilization tag and demonstrated that this lectin is a novel chitin-recognizing lectin.

  7. Canonical strigolactones are not the major determinant of tillering but important rhizospheric signals in rice

    Shinsaku Ito, Justine Braguy, Jian You Wang, Akiyoshi Yoda, Valentina Fiorilli, Ikuo Takahashi, Muhammad Jamil, Abrar Felemban, Sho Miyazaki, Teresa Mazzarella, Guan-Ting Erica Chen, Akihisa Shinozawa, Aparna Balakrishna, Lamis Berqdar, Chakravarthy Rajan, Shawkat Ali, Imran Haider, Yasuyuki Sasaki, Shunsuke Yajima, Kohki Akiyama, Luisa Lanfranco, Matias D. Zurbriggen, Takahito Nomura, Tadao Asami, Salim Al-Babili

    Science Advances 8 (44) 2022年11月4日

    出版者・発行元: American Association for the Advancement of Science (AAAS)

    DOI: 10.1126/sciadv.add1278  

    eISSN:2375-2548

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    Strigolactones (SLs) are a plant hormone inhibiting shoot branching/tillering and a rhizospheric, chemical signal that triggers seed germination of the noxious root parasitic plant Striga and mediates symbiosis with beneficial arbuscular mycorrhizal fungi. Identifying specific roles of canonical and noncanonical SLs, the two SL subfamilies, is important for developing Striga -resistant cereals and for engineering plant architecture. Here, we report that rice mutants lacking canonical SLs do not show the shoot phenotypes known for SL-deficient plants, exhibiting only a delay in establishing arbuscular mycorrhizal symbiosis, but release exudates with a significantly decreased Striga seed–germinating activity. Blocking the biosynthesis of canonical SLs by TIS108, a specific enzyme inhibitor, significantly lowered Striga infestation without affecting rice growth. These results indicate that canonical SLs are not the determinant of shoot architecture and pave the way for increasing crop resistance by gene editing or chemical treatment.

  8. Production and stably maintenance of strigolactone by transient expression of biosynthetic enzymes in Nicotiana benthamiana

    Akira Yata, Shohei Nosaki, Akiyoshi Yoda, Takahito Nomura, Kenji Miura

    Frontiers in Plant Science 13 2022年10月28日

    出版者・発行元: Frontiers Media SA

    DOI: 10.3389/fpls.2022.1027004  

    ISSN:1664-462X

    eISSN:1664-462X

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    Strigolactones (SLs) are phytohormones that play an essential role in plant–microbe interactions. The instability of SLs makes it challenging to use them for application to agriculture. In this study, we successfully produced a large amount of the 4-deoxyorobanchol (4DO), one of SLs, in the leaves of Nicotiana benthamiana, using a transient expression system to express SL biosynthetic enzymes. Using this system, the yield of 4DO was 2.1 ± 0.3 μg/gFM (fresh mass). Treatment of leaves at 80°C for 16 h killed Agrobacterium and approximately half amount of 4DO was left in the leaves (1.0 μg/gFM (calculated based on the original FM) ± 0.3). Interestingly, incubation of dried leaves at room temperature for 1 month maintained an almost equal amount of 4DO (0.9 ± 0.2 μg/gFM) in the leaves. These results suggest that high accumulation of 4DO with stability for long periods can be achieved in plant leaves.

  9. An ancestral function of strigolactones as symbiotic rhizosphere signals

    Kyoichi Kodama, Mélanie K. Rich, Akiyoshi Yoda, Shota Shimazaki, Xiaonan Xie, Kohki Akiyama, Yohei Mizuno, Aino Komatsu, Yi Luo, Hidemasa Suzuki, Hiromu Kameoka, Cyril Libourel, Jean Keller, Keiko Sakakibara, Tomoaki Nishiyama, Tomomi Nakagawa, Kiyoshi Mashiguchi, Kenichi Uchida, Kaori Yoneyama, Yoshikazu Tanaka, Shinjiro Yamaguchi, Masaki Shimamura, Pierre-Marc Delaux, Takahito Nomura, Junko Kyozuka

    Nature Communications 13 (1) 2022年7月8日

    出版者・発行元: Springer Science and Business Media LLC

    DOI: 10.1038/s41467-022-31708-3  

    eISSN:2041-1723

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    Abstract In flowering plants, strigolactones (SLs) have dual functions as hormones that regulate growth and development, and as rhizosphere signaling molecules that induce symbiosis with arbuscular mycorrhizal (AM) fungi. Here, we report the identification of bryosymbiol (BSB), an SL from the bryophyte Marchantia paleacea. BSB is also found in vascular plants, indicating its origin in the common ancestor of land plants. BSB synthesis is enhanced at AM symbiosis permissive conditions and BSB deficient mutants are impaired in AM symbiosis. In contrast, the absence of BSB synthesis has little effect on the growth and gene expression. We show that the introduction of the SL receptor of Arabidopsis renders M. paleacea cells BSB-responsive. These results suggest that BSB is not perceived by M. paleacea cells due to the lack of cognate SL receptors. We propose that SLs originated as AM symbiosis-inducing rhizosphere signaling molecules and were later recruited as plant hormone.

  10. Strigolactone biosynthesis catalyzed by cytochrome P450 and sulfotransferase in sorghum

    Akiyoshi Yoda, Narumi Mori, Kohki Akiyama, Mayu Kikuchi, Xiaonan Xie, Kenji Miura, Kaori Yoneyama, Kanna Sato‐Izawa, Shinjiro Yamaguchi, Koichi Yoneyama, David C. Nelson, Takahito Nomura

    New Phytologist 232 (5) 1999-2010 2021年10月3日

    出版者・発行元: Wiley

    DOI: 10.1111/nph.17737  

    ISSN:0028-646X

    eISSN:1469-8137

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    Summary Root parasitic plants such as Striga, Orobanche, and Phelipanche spp. cause serious damage to crop production world‐wide. Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum (Sorghum bicolor). The LGS1 gene encodes a sulfotransferase‐like protein, but its function has not been elucidated. Since the profile of strigolactones (SLs) that induce seed germination in root parasitic plants is altered in the lgs1 mutant, LGS1 is thought to be an SL biosynthetic enzyme. In order to clarify the enzymatic function of LGS1, we looked for candidate SL substrates that accumulate in the lgs1 mutants and performed in vivo and in vitro metabolism experiments. We found the SL precursor 18‐hydroxycarlactonoic acid (18‐OH‐CLA) is a substrate for LGS1. CYP711A cytochrome P450 enzymes (SbMAX1 proteins) in sorghum produce 18‐OH‐CLA. When LGS1 and SbMAX1 coding sequences were co‐expressed in Nicotiana benthamiana with the upstream SL biosynthesis genes from sorghum, the canonical SLs 5‐deoxystrigol and 4‐deoxyorobanchol were produced. This finding showed that LGS1 in sorghum uses a sulfo group to catalyze leaving of a hydroxyl group and cyclization of 18‐OH‐CLA. A similar SL biosynthetic pathway has not been found in other plant species.

  11. Conversion of carlactone to carlactonoic acid is a conserved function of <scp>MAX</scp>1 homologs in strigolactone biosynthesis

    Kaori Yoneyama, Narumi Mori, Tomoyasu Sato, Akiyoshi Yoda, Xiaonan Xie, Masanori Okamoto, Masashi Iwanaga, Toshiyuki Ohnishi, Hisashi Nishiwaki, Tadao Asami, Takao Yokota, Kohki Akiyama, Koichi Yoneyama, Takahito Nomura

    New Phytologist 218 (4) 1522-1533 2018年2月26日

    出版者・発行元: Wiley

    DOI: 10.1111/nph.15055  

    ISSN:0028-646X

    eISSN:1469-8137

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    Summary Strigolactones (SLs) are a class of plant hormones which regulate shoot branching and function as host recognition signals for symbionts and parasites in the rhizosphere. However, steps in SL biosynthesis after carlactone (CL) formation remain elusive. This study elucidated the common and diverse functions of MAX1 homologs which catalyze CL oxidation. We have reported previously that ArabidopsisMAX1 converts CL to carlactonoic acid (CLA), whereas a rice MAX1 homolog has been shown to catalyze the conversion of CL to 4‐deoxyorobanchol (4DO). To determine which reaction is conserved in the plant kingdom, we investigated the enzymatic function of MAX1 homologs in Arabidopsis, rice, maize, tomato, poplar and Selaginella moellendorffii. The conversion of CL to CLA was found to be a common reaction catalyzed by MAX1 homologs, and MAX1s can be classified into three types: A1‐type, converting CL to CLA; A2‐type, converting CL to 4DO via CLA; and A3‐type, converting CL to CLA and 4DO to orobanchol. CLA was detected in root exudates from poplar and Selaginella, but not ubiquitously in other plants examined in this study, suggesting its role as a species‐specific signal in the rhizosphere. This study provides new insights into the roles of MAX1 in endogenous and rhizosphere signaling.

︎全件表示 ︎最初の5件までを表示

MISC 2

  1. コケ植物におけるPHR転写因子によるストリゴラクトン生合成の制御

    依田彬義, 児玉恭一, 野村崇人, 経塚淳子

    植物の生長調節 58 (Supplement) 2023年

    ISSN: 1346-5406

  2. 新規ストリゴラクトンbryosymbiolの生合成

    依田彬義, 依田彬義, 謝肖男, 児玉恭一, 島崎翔太, 秋山康紀, 米山香織, 嶋村正樹, 経塚淳子, 野村崇人

    植物の生長調節 56 (Supplement) 2021年

    ISSN: 1346-5406

講演・口頭発表等 6

  1. Spatial localization of strigolactone biosynthesis and secretion in Marchantia paleacea

    Akiyoshi Yoda, Kyoichi Kodama, Masaki Shimamura, Junko Kyozuka

    IPGSA2025

  2. Regulation of strigolactone as a symbiotic rhizosphere signal in Marchantia paleacea

    Akiyoshi Yoda, Kyoichi Kodama, Shota Shimazaki, Xiaonan Xie, Kohki Akiyama, Yohei Mizuno, Pierre-Marc Delaux, Takahito Nomura, Junko Kyozuka

    17th World Congress on Parasitic Plants

  3. Regulation of strigolactone biosynthesis under nutrient deficiency in Marchantia paleacea

    Akiyoshi Yoda, Kyoichi Kodama, Takahito Nomura, Junko Kyozuka

    IPGSA2023

  4. Strigolactone biosynthesis catalyzed by LGS1 in sorghum

    Akiyoshi Yoda, Narumi Mori, Kohki Akiyama, Xiaonan Xie, Kaori Yoneyama, Koichi Yoneyama, David C. Nelson, Takahito Nomura

    3rd International Congress on Strigolactones

  5. Biochemical characterization of sorghum LGS1 enzyme involved in strigolactone biosynthesis

    Akiyoshi Yoda, Narumi Mori, Xiaonan Xie, Kaori Yoneyama, David Nelson, Kohki Akiyama, Koichi Yoneyama, Takahito Nomura

    IPGSA2019

  6. Biochemical characterization of PsMAX1 and PsLBO in Pisum sativum

    Akiyoshi Yoda, Kaori Yoneyama, Narumi Mori, Mutsumi Saito, Xiaonan Xie, Alexandre de Saint Germain, Catherine Rameau, Christine Beveridge, Kohki Akiyama, Koichi Yoneyama, Takahito Nomura

    2nd International Congress on Strigolactones

︎全件表示 ︎最初の5件までを表示

共同研究・競争的資金等の研究課題 2

  1. リン欠乏に応答したストリゴラクトン制御機構の原型の解明

    依田 彬義

    2023年4月25日 ~ 2026年3月31日

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    「陸上植物におけるストリゴラクトン(SL)のリン応答制御機構の起源」 種子植物においてリン酸欠乏により誘導される遺伝子発現の70%以上を制御するマスター転写因子としてPHOSPHATE STARVATION RESPONSE(PHR)転写因子が知られている。イネにおいてSL生合成のリン酸欠乏応答がOsPHR2により制御されていることが報告されており、PHRはコケ植物においても保存されているため陸上植物の共通祖先においてPHRによるSLのリン欠乏応答制御システムが構築されたと考えた。OsPHR2と相同性の高いフタバネゼニゴケのPHRホモログMpaPHR-like1 (MpaPHL1)、MpaPHL2を選び、機能解析を行なった。遺伝子発現解析の結果、リン酸欠乏によりMpaPHL1、MpaPHL2の発現が誘導されたため、それぞれの機能欠損変異体を作成した。現在、それら変異体を用いてSLのリン酸欠乏応答解析を行なっている。さらに、各遺伝子のプロモーター領域とCDS、レポーター遺伝子Citrineを融合したマーカー遺伝子を導入したフタバネゼニゴケを作成し、発現パターンとタンパク質の細胞内局在を調べている。 「AM菌共生シグナルとしてのSLの合成・分泌機構の原型」 フタバネゼニゴケにおいてSLがどこで合成されているのかを明らかにするため、SL生合成遺伝子のプロモーター:レポーターラインを作成した。蛍光観察の結果から、葉状体の基部腹側と仮根においてSL生合成遺伝子が発現していることを明らかにした。さらにSLがどこから分泌されているのかを明らかにするため、根寄生植物種子に対する発芽刺激活性を指標にSLの分泌部位を調べた。その結果、葉状体中肋の基部側からSLが分泌されていることがわかった。フタバネゼニゴケにおいてSLはAM菌共生シグナルとして土壌に近い基部腹側で生成・分泌されることを明らかにした。

  2. 植物の大繁栄を可能にしたストリゴラクトンの解明

    依田 彬義

    2021年4月28日 ~ 2023年3月31日

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    これまでの研究において、フタバネゼニゴケ(Marchantia paleacea)から新規SL、Bryosymbiol(BSB)を同定し、種子植物と同様にリン欠乏によりBSBの生産量が増加することを明らかにした。種子植物ではリンによる制御に加え、窒素欠乏においてもSLの生合成が促進されることが知られている。窒素は植物において最も要求量の多い栄養素であり、窒素欠乏条件下におけるSLの生産はAM菌との共生において重要であると考えられるが、その起源と進化については知られていない。今年度の研究では、フタバネゼニゴケにおけるリン欠乏と窒素欠乏に応答したSLの生産制御を調査した。栄養欠乏処理時におけるSL生合成遺伝子(MpaD27、CCD7、CCD8A、CCD8B、MAX1)の発現量解析と、仮根滲出液の根寄生植物種子に対する発芽活性試験、仮根滲出液に含まれるBSBのLC-MS/MS分析を行なった。その結果、窒素欠乏処理によりSL生合成遺伝子の発現が誘導され、BSBの生産量が増加した。また、窒素とリンの同時欠乏処理ではSL生合成遺伝子の発現に対する相加的な影響はなく、その発現量は窒素状態に依存している傾向が見られた。これらの結果から、窒素欠乏に応答したSLの制御が陸上植物に広く保存されていることが明らかになった。